STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2173PFAM: Methyltransferase type 11; methyltransferase small; Methionine biosynthesis MetW protein; Cyclopropane- fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein. (252 aa)    
Predicted Functional Partners:
Tter_0182
PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein.
      0.727
Tter_2174
PFAM: protein of unknown function DUF214; KEGG: bsu:BSU34690 hypothetical protein.
 
    0.657
Tter_2175
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU34700 hypothetical protein.
       0.581
Tter_2172
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00702 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
       0.438
Tter_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0451 binding-protein-dependent transport systems inner membrane component.
       0.437
Tter_2179
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: mno:Mnod_3911 protein of unknown function DUF21.
 
     0.420
Tter_2177
Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: bcb:BCB4264_A4557 DNA-binding response regulator.
     
 0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.