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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2179PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: mno:Mnod_3911 protein of unknown function DUF21. (431 aa)    
Predicted Functional Partners:
Tter_2178
KEGG: cvi:CV_4323 hypothetical protein; Belongs to the ComB family.
       0.551
Tter_2180
KEGG: ade:Adeh_4196 hypothetical protein.
       0.522
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.506
Tter_2176
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bsu:BSU34710 hypothetical protein.
  
    0.444
Tter_2177
Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: bcb:BCB4264_A4557 DNA-binding response regulator.
  
    0.439
Tter_2173
PFAM: Methyltransferase type 11; methyltransferase small; Methionine biosynthesis MetW protein; Cyclopropane- fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein.
 
     0.420
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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