STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2184PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: tcx:Tcr_0402 ubiquinone/menaquinone biosynthesis methyltransferase. (293 aa)    
Predicted Functional Partners:
Tter_2594
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcz:pE33L466_0386 methyltransferase.
  
     0.688
Tter_2395
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpt:Rpal_0557 methyltransferase type 11.
  
     0.669
Tter_2183
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4487 ABC transporter related.
       0.661
Tter_2182
PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_1356 glycosyl transferase, group 1.
       0.412
Tter_2758
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: pol:Bpro_1676 putative methyltransferase, S- adenosyl-L-methionine (SAM)-MTase protein.
  
     0.410
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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