STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2209PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3413 putative sugar transporter sugar binding protein. (487 aa)    
Predicted Functional Partners:
Tter_2207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
 
   0.833
Tter_2208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3251 putative permease component of ABC transporter.
 
   0.825
Tter_2474
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
     0.768
Tter_2137
PFAM: extracellular solute-binding protein family 1; KEGG: ABC transporter substrate binding protein (sugar).
  
     0.763
Tter_2513
PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar- binding protein.
  
     0.723
Tter_2025
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU28750 sugar-binding protein.
  
     0.722
Tter_0126
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.683
Tter_2646
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
  
   0.671
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.642
Tter_2644
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein).
  
     0.623
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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