STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2212Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: sat:SYN_02056 DegT/DnrJ/eryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family. (428 aa)    
Predicted Functional Partners:
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
 
  
 0.938
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
 
  
 0.842
Tter_2213
PFAM: polysaccharide deacetylase; KEGG: amc:MADE_02597 polysaccharide deacetylase.
  
    0.769
Tter_2814
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mag:amb0126 dehydrogenase and related protein.
    0.670
Tter_1304
PFAM: Nucleotidyl transferase; KEGG: pca:Pcar_0276 glucose-1-phosphate thymidylyltransferase.
  
  
 0.584
Tter_0257
KEGG: gbm:Gbem_1611 transferase hexapeptide repeat containing protein.
  
  
 0.478
Tter_2804
Acetyltransferase (isoleucine patch superfamily)- like protein; KEGG: eba:ebA5878 hypothetical protein.
  
  
 0.478
Tter_2214
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rsh:Rsph17029_4153 mandelate racemase/muconate lactonizing protein.
       0.459
Tter_1474
PFAM: oxidoreductase domain protein; aldo/keto reductase; Semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mlr6441 oxidoreductase.
  
  
 0.446
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
 
  
 0.442
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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