STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (384 aa)    
Predicted Functional Partners:
Tter_2226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 aliphatic sulfonate ABC transporter permease.
 
  0.999
Tter_2224
KEGG: mms:mma_0739 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
  0.998
Tter_2227
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.995
Tter_2223
PFAM: NADPH-dependent FMN reductase; KEGG: rpi:Rpic_1212 NADPH-dependent FMN reductase.
 
 0.993
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
  0.900
Tter_0305
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_04507 rhodanese-related sulfurtransferase.
     
  0.900
Tter_1312
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: dac:Daci_5151 rhodanese domain-containing protein.
     
  0.900
Tter_0252
PFAM: flavin reductase domain protein FMN-binding; KEGG: rec:RHECIAT_PC0000391 probable nitrilotriacetate monooxygenase component B protein.
  
 
 0.565
Tter_2222
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rru:Rru_A3399 BadM/Rrf2 family transcriptional regulator.
       0.456
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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