STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2226PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 aliphatic sulfonate ABC transporter permease. (259 aa)    
Predicted Functional Partners:
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
  0.999
Tter_2224
KEGG: mms:mma_0739 sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
 0.998
Tter_2227
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.998
Tter_2223
PFAM: NADPH-dependent FMN reductase; KEGG: rpi:Rpic_1212 NADPH-dependent FMN reductase.
 
 
  0.987
Tter_1220
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3318 ABC transporter ATP-binding protein.
  
 0.903
Tter_0230
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt2573 putative ATP-binding ABC transporter protein.
  
 0.869
Tter_0229
PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rpd:RPD_2108 extracellular solute-binding protein.
 
  
 0.795
Tter_0402
PFAM: NMT1/THI5 like domain protein; KEGG: rpb:RPB_3120 twin-arginine translocation pathway signal.
 
  
 0.560
Tter_2222
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rru:Rru_A3399 BadM/Rrf2 family transcriptional regulator.
       0.456
Tter_1222
PFAM: NMT1/THI5 like domain protein; KEGG: bcy:Bcer98_0371 NMT1/THI5-like domain- containing protein.
  
  
 0.443
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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