STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2233PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rru:Rru_A0966 xanthine dehydrogenase, molybdenum binding subunit apoprotein. (787 aa)    
Predicted Functional Partners:
Tter_2234
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: aeh:Mlg_1563 carbon monoxide dehydrogenase, small subunit.
 
 0.998
Tter_2232
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bbt:BBta_2635 carbon monoxide dehydrogenase medium subunit.
 
 0.994
Tter_2354
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: maq:Maqu_0905 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 0.982
Tter_2235
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bja:bll5666 hypothetical protein.
 
  
 0.919
Tter_2236
PFAM: protein of unknown function DUF182; KEGG: msl:Msil_0236 protein of unknown function DUF182.
 
  
 0.785
Tter_1141
PFAM: VWA containing CoxE family protein; KEGG: pla:Plav_2958 VWA containing CoxE family protein.
 
     0.784
Tter_1142
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMc00515 hypothetical protein.
 
   
 0.761
Tter_2231
KEGG: Hypothetical protein CBG23155.
       0.612
Tter_1415
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: molybdenum hydroxylase accessory protein, YgfJ family; K07141.
 
   
 0.549
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.