STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2265PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein. (356 aa)    
Predicted Functional Partners:
Tter_2266
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_2048 xylose isomerase domain- containing protein.
 
    0.859
Tter_1972
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
 
  
 0.780
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.719
Tter_0541
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1.
  
     0.655
Tter_2264
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mxa:MXAN_1465 hypothetical protein.
       0.634
Tter_2700
PFAM: oxidoreductase domain protein; KEGG: hypothetical protein.
  
     0.609
Tter_0274
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: probable dehydrogenase.
  
     0.601
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.584
Tter_2247
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SM_b21355 putative oxidoreductase protein.
  
     0.574
Tter_1236
PFAM: protein of unknown function DUF1037; KEGG: lch:Lcho_3205 hypothetical protein.
 
    0.538
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.