STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2268PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: Os01g0173600; hypothetical protein. (138 aa)    
Predicted Functional Partners:
Tter_2267
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: set:SEN1436 putative dehydratase.
     
 0.734
Tter_2269
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce9297 putative zinc-binding dehydrogenase.
  
    0.635
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
    0.508
Tter_2266
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_2048 xylose isomerase domain- containing protein.
       0.491
Tter_2265
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein.
  
    0.453
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
    0.434
Tter_0787
TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b-556 subunit.
   
    0.429
Tter_1856
PFAM: nitroreductase; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gsu:GSU2525 nitroreductase family protein.
  
    0.419
Tter_2537
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain- containing protein.
   
    0.407
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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