STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2274PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_4238 luciferase family protein. (326 aa)    
Predicted Functional Partners:
Tter_2271
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rec:RHECIAT_CH0003977 putative oxidoreductase protein.
       0.773
Tter_2272
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bha:BH0189 sorbitol dehydrogenase.
       0.773
Tter_2273
PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: kpn:KPN_02957 putative hexulose 6 phosphate synthase.
       0.773
Tter_2270
PFAM: membrane-bound metal-dependent hydrolase.
       0.714
Tter_2165
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding.
  
     0.502
Tter_1862
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: cps:CPS_4045 putative F420-dependent oxidoreductase.
 
   
 0.451
Tter_1864
TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: rpb:RPB_4407 LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.439
Tter_2143
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: jan:Jann_0506 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.422
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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