Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2284Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: mlo:mll1745 transcription regulator. (242 aa)    
Predicted Functional Partners:
Tter_2285
PFAM: ADP-ribosylation/Crystallin J1; KEGG: mlo:mll1744 hypothetical protein.
 
     0.834
Tter_2287
PFAM: PfkB domain protein; KEGG: pfl:PFL_1811 carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.815
Tter_2286
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pfo:Pfl01_4136 permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.814
Tter_2283
PFAM: protein of unknown function DUF190; KEGG: rpe:RPE_2850 protein of unknown function DUF190.
       0.541
Tter_1996
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mll6911 transcriptional regulator.
  
  
0.516
Tter_1124
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat- containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
  
 0.485
Tter_1514
KEGG: sun:SUN_2245 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
  
  
 0.434
Tter_2697
PFAM: amidohydrolase; KEGG: sus:Acid_5572 N-acetylglucosamine 6-phosphate deacetylase.
  
  
 0.434
Tter_0199
KEGG: hypothetical protein.
  
    0.432
Tter_1329
PFAM: Cupin 2 conserved barrel domain protein.
  
    0.432
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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