STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2287PFAM: PfkB domain protein; KEGG: pfl:PFL_1811 carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family. (313 aa)    
Predicted Functional Partners:
Tter_2285
PFAM: ADP-ribosylation/Crystallin J1; KEGG: mlo:mll1744 hypothetical protein.
     0.990
Tter_2286
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pfo:Pfl01_4136 permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.919
Tter_2284
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: mlo:mll1745 transcription regulator.
 
   
 0.817
Tter_1525
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ccs:CCNA_01359 myo-inositol catabolism protein IolB.
  
  
 0.546
Tter_0569
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pat:Patl_3506 inosine/uridine-preferring nucleoside hydrolase.
 
  
 0.542
Tter_2283
PFAM: protein of unknown function DUF190; KEGG: rpe:RPE_2850 protein of unknown function DUF190.
       0.541
Tter_2311
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rsh:Rsph17029_1558 inosine/uridine-preferring nucleoside hydrolase.
 
  
 0.541
hisA
TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: ank:AnaeK_0751 histidine biosynthesis protein.
  
    0.515
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
  
 0.500
Tter_1524
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
  
 0.493
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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