STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2310PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: hypothetical protein. (888 aa)    
Predicted Functional Partners:
Tter_2730
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: sus:Acid_5289 2-keto-3-deoxy-phosphogluconate aldolase.
 
  
 0.658
Tter_2510
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bha:BH2137 IclR family transcriptional regulator.
 
  
 0.579
Tter_2311
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rsh:Rsph17029_1558 inosine/uridine-preferring nucleoside hydrolase.
       0.545
Tter_2277
PFAM: PfkB domain protein; KEGG: nar:Saro_3516 ribokinase-like domain- containing protein.
 
   
 0.525
Tter_2181
PFAM: HpcH/HpaI aldolase; KEGG: bra:BRADO2598 putative aldolase; Belongs to the HpcH/HpaI aldolase family.
    0.504
Tter_0620
KEGG: sfu:Sfum_3568 hypothetical protein.
 
     0.491
Tter_2123
KEGG: sfu:Sfum_3568 hypothetical protein.
 
     0.479
Tter_0269
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: scl:sce8243 fumarylacetoacetase family protein.
 
   
 0.453
Tter_2422
PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein.
 
     0.402
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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