STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2312Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: xcv:XCV3207 alpha-L-fucosidase. (466 aa)    
Predicted Functional Partners:
Tter_1903
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL100274 putative fucosidase.
  
  
 
0.929
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.720
Tter_2468
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.719
Tter_2461
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sew:SeSA_A3313 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.629
Tter_2336
PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
  
     0.608
Tter_2215
PFAM: protein of unknown function DUF1680; KEGG: mlo:mlr2247 hypothetical protein.
  
     0.575
Tter_2318
KEGG: sus:Acid_1828 hypothetical protein.
 
   
 0.552
Tter_1126
PFAM: protein of unknown function DUF1680; KEGG: sed:SeD_A4064 hypothetical protein.
  
     0.551
Tter_0622
KEGG: smd:Smed_2312 hypothetical protein.
 
   
 0.531
Tter_2345
KEGG: cak:Caul_2402 hypothetical protein.
 
   
 0.512
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.