STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2314Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mno:Mnod_7955 transcriptional regulator, GntR family. (252 aa)    
Predicted Functional Partners:
Tter_1996
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mll6911 transcriptional regulator.
 
  
 0.805
Tter_2315
PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar- binding protein.
       0.572
Tter_2510
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bha:BH2137 IclR family transcriptional regulator.
  
  
 0.558
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
       0.539
Tter_2316
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
       0.520
Tter_2317
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
       0.520
Tter_2318
KEGG: sus:Acid_1828 hypothetical protein.
       0.460
Tter_0187
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_3022 acetolactate synthase, small subunit.
   
    0.418
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.