STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2318KEGG: sus:Acid_1828 hypothetical protein. (663 aa)    
Predicted Functional Partners:
Tter_2316
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
    0.679
Tter_2317
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
  
    0.676
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.620
Tter_2315
PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar- binding protein.
       0.610
Tter_2468
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.609
Tter_2499
PFAM: ADP-ribosylation/Crystallin J1; KEGG: mes:Meso_1097 hypothetical protein.
  
     0.591
Tter_2039
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
 
     0.579
Tter_0100
PFAM: ADP-ribosylation/Crystallin J1; KEGG: mes:Meso_1097 hypothetical protein.
  
     0.560
Tter_2312
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: xcv:XCV3207 alpha-L-fucosidase.
 
  
 0.556
Tter_2433
KEGG: bsu:BSU30250 hypothetical protein.
  
     0.538
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.