STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2345KEGG: cak:Caul_2402 hypothetical protein. (274 aa)    
Predicted Functional Partners:
Tter_1539
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sat:SYN_00152 NADH:ubiquinone oxidoreductase, NADH-binding subunit.
    
   0.830
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
   0.826
Tter_1540
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMc02524 formate dehydrogenase subunit gamma.
    
   0.824
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.823
Tter_2537
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain- containing protein.
   
 
 0.773
Tter_2346
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS0183 Bcr/CflA subfamily drug resistance transporter.
       0.762
Tter_2347
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bcb:BCB4264_A1787 putative MATE efflux protein.
       0.762
Tter_2344
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein.
       0.756
Tter_2348
PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_7435 hydrolase, alpha/beta fold family.
     
 0.649
Tter_0269
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: scl:sce8243 fumarylacetoacetase family protein.
  
     0.633
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.