STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2347TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bcb:BCB4264_A1787 putative MATE efflux protein. (476 aa)    
Predicted Functional Partners:
Tter_2346
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS0183 Bcr/CflA subfamily drug resistance transporter.
     
 0.779
Tter_2345
KEGG: cak:Caul_2402 hypothetical protein.
       0.762
Tter_2344
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein.
  
    0.743
Tter_2046
PFAM: Squalene/phytoene synthase; KEGG: bav:BAV2418 phytoene synthase.
   
 
 0.700
Tter_2348
PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_7435 hydrolase, alpha/beta fold family.
       0.623
Tter_0913
KEGG: dvm:DvMF_1440 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.586
Tter_1350
PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: mxa:MXAN_3793 30S ribosomal protein S1.
  
    0.545
Tter_2351
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bca:BCE_2474 ABC transporter, ATP- binding/permease protein.
 
  
 0.536
Tter_2349
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: azo:azo2988 chromate reductase.
       0.532
Tter_2343
PFAM: protein of unknown function DUF421; KEGG: smt:Smal_3940 hypothetical protein.
       0.477
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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