STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2352Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ppr:PBPRA1008 MarR family transcriptional regulator. (173 aa)    
Predicted Functional Partners:
Tter_2350
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bce:BC2372 multidrug ABC transporter permease/ATP-binding protein.
     
 0.714
Tter_2351
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bca:BCE_2474 ABC transporter, ATP- binding/permease protein.
     
 0.714
Tter_2349
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: azo:azo2988 chromate reductase.
       0.615
Tter_2353
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sus:Acid_7219 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
       0.523
Tter_2354
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: maq:Maqu_0905 2Fe-2S iron-sulfur cluster binding domain-containing protein.
       0.523
Tter_2348
PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_7435 hydrolase, alpha/beta fold family.
       0.518
Tter_2322
PFAM: regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: bpt:Bpet1980 MarR family transcriptional regulator.
  
     0.469
Tter_2347
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bcb:BCB4264_A1787 putative MATE efflux protein.
  
  
 0.465
Tter_2346
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS0183 Bcr/CflA subfamily drug resistance transporter.
       0.428
Tter_2345
KEGG: cak:Caul_2402 hypothetical protein.
       0.423
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.