STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2373PFAM: YdjC family protein; KEGG: vfm:VFMJ11_1416 cellobiose phosphotransferase system CelC. (299 aa)    
Predicted Functional Partners:
Tter_2372
PFAM: inositol monophosphatase; KEGG: slo:Shew_2321 inositol monophosphatase.
       0.773
Tter_2374
Multi-sensor signal transduction histidine kinase; KEGG: mxa:MXAN_7398 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein.
       0.636
Tter_2666
KEGG: atc:AGR_L_146 hypothetical protein.
 
     0.507
Tter_0621
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sfu:Sfum_1980 xylose isomerase domain protein TIM barrel.
  
     0.502
Tter_2336
PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
  
     0.475
Tter_1906
KEGG: bcm:Bcenmc03_6969 hypothetical protein.
  
     0.473
Tter_1798
PFAM: protein of unknown function DUF214; KEGG: mlo:mlr4464 ABC transporter integral membrane protein.
 
     0.451
Tter_2249
PFAM: LmbE family protein; KEGG: sus:Acid_6225 LmbE family protein.
  
   
 0.437
Tter_2375
Hypothetical protein.
       0.430
Tter_0276
PFAM: protein of unknown function DUF214; KEGG: hypothetical protein.
  
     0.428
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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