Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2376Hypothetical protein; KEGG: sat:SYN_00043 gluconate kinase. (178 aa)    
Predicted Functional Partners:
Tter_2377
PFAM: PspC domain protein; KEGG: cps:CPS_4752 phage shock domain-containing protein.
       0.551
Tter_0840
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.541
Tter_0373
PFAM: protein of unknown function DUF101; KEGG: cbd:CBUD_1267 hypothetical cytosolic protein.
   
    0.523
Tter_2378
PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2388 major facilitator superfamily MFS_1.
       0.460
Tter_0301
KEGG: bxe:Bxe_A3924 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein.
   
  
 0.439
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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