STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2399PFAM: ABC-2 type transporter; KEGG: aba:Acid345_0285 ABC multidrug efflux pump, inner membrane subunit. (241 aa)    
Predicted Functional Partners:
Tter_2398
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related.
 
    0.948
Tter_2397
PFAM: protein of unknown function DUF488; KEGG: gsu:GSU3442 hypothetical protein.
       0.773
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
  
  
  0.637
Tter_2400
Hypothetical protein.
       0.623
Tter_2609
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein.
 
    0.618
Tter_0475
PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_0985 hypothetical protein.
 
 
  0.610
Tter_2250
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
  
  
  0.582
Tter_1122
KEGG: ank:AnaeK_4022 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.561
Tter_2396
PFAM: SMP-30/Gluconolaconase/LRE domain protein; Strictosidine synthase; NHL repeat containing protein; KEGG: bbr:BB0722 hypothetical protein.
       0.548
Tter_1384
Conserved hypothetical protein.
  
     0.484
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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