| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Tter_2421 | Tter_2422 | Tter_2421 | Tter_2422 | Hypothetical protein. | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | 0.466 |
| Tter_2421 | Tter_2423 | Tter_2421 | Tter_2423 | Hypothetical protein. | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | 0.466 |
| Tter_2422 | Tter_2421 | Tter_2422 | Tter_2421 | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | Hypothetical protein. | 0.466 |
| Tter_2422 | Tter_2423 | Tter_2422 | Tter_2423 | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | 0.994 |
| Tter_2422 | Tter_2424 | Tter_2422 | Tter_2424 | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | PFAM: NERD domain protein; KEGG: vsp:VS_1643 hypothetical protein. | 0.409 |
| Tter_2423 | Tter_2421 | Tter_2423 | Tter_2421 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | Hypothetical protein. | 0.466 |
| Tter_2423 | Tter_2422 | Tter_2423 | Tter_2422 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | 0.994 |
| Tter_2423 | Tter_2424 | Tter_2423 | Tter_2424 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | PFAM: NERD domain protein; KEGG: vsp:VS_1643 hypothetical protein. | 0.409 |
| Tter_2423 | Tter_2620 | Tter_2423 | Tter_2620 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.438 |
| Tter_2423 | gyrB | Tter_2423 | Tter_0051 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.824 |
| Tter_2423 | ribBA | Tter_2423 | Tter_2767 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.563 |
| Tter_2423 | topA | Tter_2423 | Tter_0485 | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.410 |
| Tter_2424 | Tter_2422 | Tter_2424 | Tter_2422 | PFAM: NERD domain protein; KEGG: vsp:VS_1643 hypothetical protein. | PFAM: type III effector Hrp-dependent outers; KEGG: dde:Dde_0128 hypothetical protein. | 0.409 |
| Tter_2424 | Tter_2423 | Tter_2424 | Tter_2423 | PFAM: NERD domain protein; KEGG: vsp:VS_1643 hypothetical protein. | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | 0.409 |
| Tter_2620 | Tter_2423 | Tter_2620 | Tter_2423 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | 0.438 |
| Tter_2620 | gyrB | Tter_2620 | Tter_0051 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.448 |
| Tter_2620 | ribBA | Tter_2620 | Tter_2767 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
| Tter_2620 | topA | Tter_2620 | Tter_0485 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.467 |
| gyrB | Tter_2423 | Tter_0051 | Tter_2423 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bbr:BB3214 putative pyridoxal phosphate biosynthetic protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; Belongs to the PdxA family. | 0.824 |
| gyrB | Tter_2620 | Tter_0051 | Tter_2620 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.448 |