Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2432PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: vfm:VFMJ11_A0662 topoisomerase-associated Zn- finger domain protein. (206 aa)    
Predicted Functional Partners:
Tter_2433
KEGG: bsu:BSU30250 hypothetical protein.
       0.521
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.510
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.496
Tter_0611
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_5827 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
    0.493
Tter_0861
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_5827 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
    0.493
Tter_1595
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
   
    0.493
Tter_2538
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_2927 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
    0.493
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: glo:Glov_2116 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.485
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.472
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.445
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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