STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2436PFAM: glycoside hydrolase family 38; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like. (855 aa)    
Predicted Functional Partners:
Tter_1503
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: hypothetical protein; K01191 alpha- mannosidase.
  
  
  0.933
Tter_2525
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; KEGG: hypothetical protein; K01191 alpha- mannosidase.
  
  
  0.926
Tter_1501
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: alpha-mannosidase protein; K01191 alpha- mannosidase.
  
  
  0.920
Tter_2266
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_2048 xylose isomerase domain- containing protein.
 
     0.590
Tter_2519
KEGG: tbd:Tbd_0735 hypothetical protein.
  
     0.579
Tter_1809
KEGG: scl:sce2260 putative secreted protein.
 
    0.577
Tter_2039
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
  
    0.553
Tter_2437
PFAM: CBS domain containing protein; transport- associated; transporter-associated region; SMART: CBS domain containing protein; KEGG: aeh:Mlg_0397 CBS domain-containing protein.
       0.542
Tter_2468
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.542
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.533
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.