STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2439PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D. (699 aa)    
Predicted Functional Partners:
Tter_2305
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.949
Tter_2324
PFAM: glycoside hydrolase clan GH-D; KEGG: alpha-galactosidase.
  
  
 
0.929
Tter_2461
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sew:SeSA_A3313 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.929
Tter_2514
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_7394 glycoside hydrolase, clan GH-D.
  
  
 
0.929
Tter_2515
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_7394 glycoside hydrolase, clan GH-D.
  
  
 
0.929
Tter_2448
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D.
  
  
 
0.925
Tter_1475
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mes:Meso_3687 alpha amylase, catalytic region.
 
 
 0.919
Tter_2516
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: aba:Acid345_0901 beta-galactosidase.
 
  
 0.904
Tter_0137
PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein.
    
  0.901
Tter_0216
PFAM: glycoside hydrolase family 4; KEGG: lch:Lcho_3239 glycoside hydrolase family protein.
    
  0.901
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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