STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2449Hypothetical protein. (58 aa)    
Predicted Functional Partners:
Tter_2450
Hypothetical protein.
       0.773
Tter_2451
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
       0.762
Tter_2452
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1866 sugar transport system (permease) (binding protein dependent transporter).
       0.717
Tter_2453
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
       0.717
Tter_2448
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D.
       0.528
Tter_2454
Alkylglycerone-phosphate synthase; PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_1036 FAD linked oxidase-like.
       0.473
Tter_2455
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: hypothetical protein.
       0.473
Tter_2456
PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: rru:Rru_A1345 fructose-bisphosphate aldolase.
       0.473
Tter_2457
PFAM: glucose-6-phosphate isomerase; KEGG: aba:Acid345_0653 glucose-6-phosphate isomerase.
       0.467
Tter_2458
1-phosphofructokinase; KEGG: rpe:RPE_0769 PfkB domain protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein.
       0.467
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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