STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2451PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein. (449 aa)    
Predicted Functional Partners:
Tter_2453
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
 
   0.909
Tter_2452
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1866 sugar transport system (permease) (binding protein dependent transporter).
 
   0.885
Tter_2449
Hypothetical protein.
       0.762
Tter_2450
Hypothetical protein.
       0.762
Tter_0126
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.738
Tter_2506
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20970 putative sugar uptake ABC transporter permease protein.
  
   0.731
Tter_0263
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
  
   0.718
Tter_2523
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
   0.714
Tter_0507
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
   0.689
Tter_2316
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
   0.676
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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