STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2454Alkylglycerone-phosphate synthase; PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_1036 FAD linked oxidase-like. (467 aa)    
Predicted Functional Partners:
Tter_0568
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bha:BH2135 glycolate oxidase iron-sulfur subunit.
  
 0.838
Tter_2455
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: hypothetical protein.
  
  
 0.806
Tter_2456
PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: rru:Rru_A1345 fructose-bisphosphate aldolase.
  
    0.778
Tter_2458
1-phosphofructokinase; KEGG: rpe:RPE_0769 PfkB domain protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein.
  
    0.765
Tter_2457
PFAM: glucose-6-phosphate isomerase; KEGG: aba:Acid345_0653 glucose-6-phosphate isomerase.
       0.762
Tter_2459
PFAM: ROK family protein; KEGG: aba:Acid345_0651 sugar kinase.
       0.762
Tter_2460
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: aba:Acid345_0656 transcriptional regulator, DeoR family.
       0.762
Tter_2461
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sew:SeSA_A3313 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
       0.762
Tter_0654
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: sat:SYN_02637 electron transfer flavoprotein alpha-subunit.
 
 
 0.598
Tter_0655
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
 
 
 0.587
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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