Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tter_2468PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. (807 aa)    
Predicted Functional Partners:
Tter_0622
KEGG: smd:Smed_2312 hypothetical protein.
 
     0.774
Tter_2063
PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1.
  
     0.745
Tter_2312
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: xcv:XCV3207 alpha-L-fucosidase.
  
     0.719
Tter_2469
KEGG: scl:sce1953 hypothetical protein.
       0.709
Tter_2471
PFAM: cobalamin synthesis protein P47K; KEGG: bca:BCE_A0164 cobalamin synthesis protein/P47K family protein.
       0.708
Tter_1987
PFAM: ADP-ribosylation/Crystallin J1; KEGG: hypothetical protein.
  
     0.703
Tter_1903
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL100274 putative fucosidase.
  
     0.699
Tter_2470
Chaperonin Cpn60/TCP-1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
   
   0.691
Tter_2472
Hypothetical protein; KEGG: rso:RSc1120 putative transporter DNA uptake transmembrane protein.
       0.690
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
       0.690
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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