STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2486Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: mlo:mlr7274 hypothetical protein. (287 aa)    
Predicted Functional Partners:
Tter_2482
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: YALI0F01628p; K01808 ribose 5-phosphate isomerase B.
 
  
 0.845
Tter_2484
PFAM: Dak kinase; KEGG: sme:SM_b20767 putative dihydroxyacetone (glycerone) kinase protein.
 
    0.801
Tter_2483
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: oan:Oant_3102 glycerone kinase.
 
    0.800
Tter_2480
PFAM: carbohydrate kinase FGGY; KEGG: vei:Veis_2016 carbohydrate kinase, FGGY.
 
  
 0.787
Tter_2485
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vei:Veis_2048 HAD-superfamily hydrolase, subfamily IA, variant 3.
  
    0.781
Tter_2481
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bra:BRADO4794 putative D-3-phosphoglycerate dehydrogenase.
 
     0.760
Tter_2458
1-phosphofructokinase; KEGG: rpe:RPE_0769 PfkB domain protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein.
 
  
 0.630
Tter_0138
1-phosphofructokinase; KEGG: bcz:BCZK1642 tagatose-6-phosphate kinase, phosphofructokinase I; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.628
Tter_0890
PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; ATP-grasp domain protein; KEGG: sus:Acid_0167 CoA-binding domain-containing protein.
    
   0.597
Tter_2488
PFAM: extracellular solute-binding protein family 1; KEGG: acr:Acry_2566 extracellular solute-binding protein.
 
     0.574
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.