STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2496PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2145 binding-protein-dependent transport systems inner membrane component. (311 aa)    
Predicted Functional Partners:
Tter_2497
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2246 permease protein of sugar ABC transporter.
   0.958
Tter_2501
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1095 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.922
Tter_1289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL1659 putative transmembrane component of ABC transporter.
 
   0.828
Tter_1961
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90190 putative permease component of ABC transporter.
 
   0.823
Tter_2001
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4664 binding-protein-dependent transport systems inner membrane component.
 
   0.823
Tter_2657
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL2327 putative transmembrane component of ABC transporter.
 
   0.822
Tter_2500
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1096 binding-protein-dependent transport systems inner membrane component.
 
   0.818
Tter_0429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG.
 
   0.798
Tter_0973
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bca:BCE_4067 sugar ABC transporter, ATP- binding protein.
 
   0.775
Tter_2301
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
 
   0.770
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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