Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tter_2516Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: aba:Acid345_0901 beta-galactosidase. (670 aa)    
Predicted Functional Partners:
Tter_2514
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_7394 glycoside hydrolase, clan GH-D.
 
  
 0.993
Tter_2515
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_7394 glycoside hydrolase, clan GH-D.
 
  
 0.992
Tter_2439
PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D.
 
  
 0.973
Tter_2324
PFAM: glycoside hydrolase clan GH-D; KEGG: alpha-galactosidase.
 
  
 0.969
Tter_2642
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase.
  
  
 
0.917
Tter_2461
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sew:SeSA_A3313 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
   
 0.911
Tter_0137
PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein.
    
  0.902
Tter_0216
PFAM: glycoside hydrolase family 4; KEGG: lch:Lcho_3239 glycoside hydrolase family protein.
    
  0.902
Tter_2038
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
   
 
  0.900
Tter_2517
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase; K00059.
       0.773
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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