STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2533PFAM: PfkB domain protein; KEGG: kpe:KPK_3938 kinase, PfkB family. (379 aa)    
Predicted Functional Partners:
Tter_2534
KEGG: bsu:BSU04200 hypothetical protein.
 
     0.864
Tter_2532
PFAM: oxidoreductase domain protein; KEGG: thuBf; myo-inositol 2-dehydrogenase protein.
 
    0.840
Tter_2531
PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: aldolase protein; K01623 fructose- bisphosphate aldolase, class I.
 
  
 0.822
Tter_2228
KEGG: ect:ECIAI39_3749 hypothetical protein.
 
  
 0.682
Tter_0244
KEGG: gur:Gura_3250 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
    
 0.667
Tter_2530
PFAM: glycoside hydrolase family 39; KEGG: cak:Caul_3132 xylan 1,4-beta-xylosidase.
       0.664
Tter_2529
PFAM: Carbohydrate-binding family 9; KEGG: bbt:BBta_1040 hypothetical protein.
       0.601
Tter_2691
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: mlo:mlr2441 permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.582
Tter_2386
KEGG: bsu:BSU04200 hypothetical protein.
 
     0.574
Tter_1525
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: ccs:CCNA_01359 myo-inositol catabolism protein IolB.
  
  
 0.546
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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