STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2540KEGG: sus:Acid_2929 major facilitator transporter. (352 aa)    
Predicted Functional Partners:
Tter_2535
PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_2929 major facilitator transporter.
     0.963
Tter_2537
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain- containing protein.
 
   
 0.951
Tter_2539
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: sus:Acid_2928 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.919
Tter_2538
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_2927 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.912
Tter_2536
Hypothetical protein.
       0.762
Tter_1773
KEGG: bha:BH1004 hypothetical protein.
  
     0.624
Tter_1084
PFAM: Chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: sus:Acid_7899 CBS domain-containing protein.
 
   
 0.589
Tter_2541
Hypothetical protein.
       0.516
Tter_2027
KEGG: ank:AnaeK_0999 hypothetical protein.
  
     0.511
Tter_1873
PFAM: metallophosphoesterase; KEGG: gsu:GSU1724 nuclease SbcCD, D subunit, putative.
  
     0.506
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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