Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_2554Flavodoxin-like protein; KEGG: sbc:SbBS512_E4320 protoporphyrinogen oxidase. (169 aa)    
Predicted Functional Partners:
Tter_2562
Flavodoxin-like protein; KEGG: pmu:PM1499 protoporphyrinogen oxidase.
  
  
 
0.919
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.913
Tter_1872
KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase, putative.
     
  0.900
Tter_2555
PFAM: PspC domain protein; KEGG: hne:HNE_3296 phage shock protein C.
       0.678
Tter_2556
Hypothetical protein.
       0.610
Tter_2553
Hypothetical protein.
       0.518
Tter_2551
PFAM: protein of unknown function DUF125 transmembrane; KEGG: bxe:Bxe_B1618 hypothetical protein.
 
     0.463
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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