STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2566PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcu:BCAH820_0189 hypothetical protein. (197 aa)    
Predicted Functional Partners:
Tter_2557
PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcu:BCAH820_0189 hypothetical protein.
  
  
 
0.904
Tter_0305
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_04507 rhodanese-related sulfurtransferase.
  
 
  0.901
Tter_1312
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: dac:Daci_5151 rhodanese domain-containing protein.
  
 
  0.901
Tter_1460
KEGG: bcy:Bcer98_1709 hypothetical protein.
  
     0.582
Tter_2564
TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afr:AFE_2327 magnesium-translocating P-type ATPase.
  
 
  0.511
Tter_2567
PFAM: UspA domain protein; KEGG: net:Neut_1753 UspA domain-containing protein.
  
    0.501
Tter_1502
PFAM: protein of unknown function DUF624; KEGG: bsu:BSU30090 hypothetical protein.
  
     0.464
Tter_2153
KEGG: smd:Smed_6282 hypothetical protein.
  
     0.430
Tter_2568
PFAM: flavodoxin/nitric oxide synthase; KEGG: smd:Smed_5291 TrpR binding protein WrbA.
  
    0.426
Tter_2565
Hypothetical protein.
       0.423
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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