STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2567PFAM: UspA domain protein; KEGG: net:Neut_1753 UspA domain-containing protein. (325 aa)    
Predicted Functional Partners:
Tter_2559
PFAM: UspA domain protein; KEGG: ade:Adeh_1445 universal stress protein UspA.
  
     0.767
Tter_2568
PFAM: flavodoxin/nitric oxide synthase; KEGG: smd:Smed_5291 TrpR binding protein WrbA.
  
  
 0.582
Tter_2569
PFAM: UspA domain protein; KEGG: neu:NE1201 universal stress protein.
 
    
0.579
Tter_2566
PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcu:BCAH820_0189 hypothetical protein.
  
    0.496
Tter_0311
TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: sat:SYN_02919 6-O-methylguanine DNA methyltransferase.
   
    0.414
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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