Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2570PFAM: LmbE family protein; KEGG: bpt:Bpet3606 hypothetical protein. (236 aa)    
Predicted Functional Partners:
Tter_2571
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
 
     0.919
Tter_2574
PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter, periplasmic ligand binding protein.
 
     0.813
Tter_2572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7213 ABC transporter, permease protein.
       0.768
Tter_2573
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_1975 permease component of a sugar import ABC transporter.
       0.768
Tter_2575
Phophonate C-P lyase system transcriptional regulator PhnF, GntR family; KEGG: bce:BC4053 GntR family transcriptional regulator; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.590
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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