STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2571PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein. (316 aa)    
Predicted Functional Partners:
Tter_2570
PFAM: LmbE family protein; KEGG: bpt:Bpet3606 hypothetical protein.
 
     0.919
Tter_2574
PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter, periplasmic ligand binding protein.
 
     0.824
Tter_2572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7213 ABC transporter, permease protein.
       0.780
Tter_2573
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_1975 permease component of a sugar import ABC transporter.
       0.776
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.743
Tter_2604
PFAM: beta-lactamase; KEGG: aba:Acid345_2615 uncharacterised conserved protein UCP016719.
    0.647
lysZ
Acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
  
  
 0.631
Tter_1513
PFAM: conserved hypothetical protein; KEGG: bha:BH0674 hypothetical protein.
 
     0.614
argG
Argininosuccinate synthase; KEGG: Os12g0235800; hypothetical protein; K01940 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.599
argG-2
KEGG: sfu:Sfum_0061 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.599
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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