STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2574PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter, periplasmic ligand binding protein. (453 aa)    
Predicted Functional Partners:
Tter_2572
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7213 ABC transporter, permease protein.
 
   0.871
Tter_2573
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xca:xccb100_1975 permease component of a sugar import ABC transporter.
 
   0.832
Tter_2571
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
 
     0.825
Tter_2570
PFAM: LmbE family protein; KEGG: bpt:Bpet3606 hypothetical protein.
 
     0.813
Tter_2315
PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar- binding protein.
  
     0.725
Tter_0265
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.711
Tter_1963
PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL2325 putative solute-binding component of ABC transporter.
  
     0.658
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.642
Tter_2575
Phophonate C-P lyase system transcriptional regulator PhnF, GntR family; KEGG: bce:BC4053 GntR family transcriptional regulator; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
   
   0.623
Tter_0271
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
     0.577
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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