STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2578PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmr:Mmar10_0505 ABC transporter related. (282 aa)    
Predicted Functional Partners:
Tter_2579
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
 
    0.955
Tter_1853
PFAM: ABC-2 type transporter; KEGG: pmr:PMI0616 ABC transporter, permease protein.
    0.825
Tter_2250
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
 
    0.777
Tter_2577
PFAM: regulatory protein TetR; KEGG: msl:Msil_2443 transcriptional regulator, TetR family.
       0.774
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
 
    0.684
Tter_0587
PFAM: inner-membrane translocator; KEGG: acr:Acry_3094 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
      0.666
Tter_0904
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2853 amino acid ABC transporter permease.
    
 0.491
Tter_1802
KEGG: mes:Meso_4488 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.483
Tter_1438
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
 
    0.421
Tter_1773
KEGG: bha:BH1004 hypothetical protein.
  
 
 0.418
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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