Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2588PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: similar to beta-mannosidase; K01192 beta- mannosidase. (819 aa)    
Predicted Functional Partners:
Tter_2698
PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.649
Tter_2587
Hypothetical protein.
       0.542
Tter_2586
KEGG: nme:NMB0066 rRNA adenine N-6- methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.524
Tter_1479
Endo-1,4-beta-xylanase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.523
Tter_1310
PFAM: carbonic anhydrase; KEGG: scl:sce1313 putative carbonate hydratase.
  
     0.514
Tter_2195
PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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