STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2600PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: dac:Daci_4815 ATP-dependent transcription regulator LuxR. (1108 aa)    
Predicted Functional Partners:
Tter_1124
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat- containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
 
  
 0.658
Tter_2599
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KR domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: gdi:GDI1625 putative dihydroflavonol-4- reductase.
       0.576
Tter_0535
PFAM: YceI family protein; KEGG: sus:Acid_1354 YceI family protein; Belongs to the UPF0312 family.
  
     0.522
Tter_2510
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bha:BH2137 IclR family transcriptional regulator.
  
  
 0.514
Tter_2859
PFAM: transcriptional activator domain; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
 
  
0.481
Tter_0991
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bcr:BCAH187_A3910 serine/threonine protein kinase.
   
 
 0.460
Tter_2194
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
  
  
 0.448
Tter_2242
Hypothetical protein.
     
 0.422
Tter_2597
PFAM: protein of unknown function DUF185; KEGG: gsu:GSU0476 hypothetical protein.
       0.420
Tter_2598
PFAM: histidine triad (HIT) protein; KEGG: sus:Acid_4300 histidine triad (HIT) protein.
       0.420
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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