STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2608PFAM: ABC-2 type transporter; KEGG: bba:Bd1727 ABC transporter, permease protein, putative. (244 aa)    
Predicted Functional Partners:
Tter_2802
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4641 ABC transporter related.
  
 
 0.959
Tter_2609
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein.
 
   
 0.941
Tter_2607
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cak:Caul_1797 NAD-dependent epimerase/dehydratase.
  
  
 0.785
Tter_2610
PFAM: sulfatase; KEGG: sus:Acid_6855 sulfatase.
       0.563
Tter_2801
PFAM: glycosyl transferase family 2; KEGG: aeh:Mlg_2352 glycosyl transferase family protein.
  
  
 0.531
Tter_0475
PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_0985 hypothetical protein.
 
  
 0.499
Tter_2614
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_1702 extracellular solute-binding protein family 1.
    
  0.475
Tter_2036
PFAM: CsbD family protein; KEGG: hypothetical protein.
  
    0.440
Tter_2399
PFAM: ABC-2 type transporter; KEGG: aba:Acid345_0285 ABC multidrug efflux pump, inner membrane subunit.
 
  
 
0.433
Tter_2622
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
   
    0.428
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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