STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2614PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_1702 extracellular solute-binding protein family 1. (461 aa)    
Predicted Functional Partners:
Tter_2616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component.
 
   0.895
Tter_2615
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
   0.840
Tter_2218
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.772
Tter_0427
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3413 putative sugar transporter sugar binding protein.
  
     0.765
Tter_2474
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
     0.761
Tter_2524
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.758
Tter_0183
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.732
Tter_0265
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.732
Tter_2617
PFAM: glycoside hydrolase family 4; KEGG: mag:amb2735 alpha-galactosidase/6-phospho- beta-glucosidase.
       0.711
Tter_0126
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.663
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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