STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2639PFAM: cyclase/dehydrase; KEGG: ank:AnaeK_1018 cyclase/dehydrase. (162 aa)    
Predicted Functional Partners:
Tter_1470
KEGG: rce:RC1_2168 hypothetical protein.
  
     0.620
Tter_0448
PFAM: glycosyl transferase family 2; KEGG: azo:azo1719 hypothetical protein.
  
     0.606
Tter_0150
PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_0743 glycosyltransferase.
  
     0.602
Tter_2638
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pmr:PMI2884 nitrogen regulation protein NR(I) (two-component system response regulator).
       0.594
Tter_2394
PFAM: Domain of unknown function DUF1801.
  
     0.571
Tter_1190
KEGG: aba:Acid345_2864 hypothetical protein.
 
     0.507
Tter_1921
PFAM: protein of unknown function DUF1470; KEGG: bcy:Bcer98_2131 hypothetical protein.
  
     0.500
Tter_0147
PFAM: glycosyl transferase family 9; KEGG: tbd:Tbd_0742 ADP-heptose--LPS heptosyltransferase II.
  
    0.423
Tter_2640
Phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: lch:Lcho_1977 phosphoribosylformylglycinamidine cyclo-ligase.
       0.423
Tter_2637
KEGG: tbd:Tbd_2765 hypothetical protein.
       0.421
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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