STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2645PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease). (311 aa)    
Predicted Functional Partners:
Tter_2644
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein).
 
  0.995
Tter_2646
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
  0.991
Tter_0973
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bca:BCE_4067 sugar ABC transporter, ATP- binding protein.
 
  0.915
Tter_2492
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_2015 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  0.908
Tter_2491
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL2899 putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
  0.907
Tter_2023
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease).
 
   0.820
Tter_2616
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component.
 
   0.809
Tter_0429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG.
 
   0.781
Tter_0831
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_460 lactose transport system permease protein lacG.
 
   0.779
Tter_2207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease.
  
   0.777
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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