Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_2664KEGG: mno:Mnod_5589 hypothetical protein. (975 aa)    
Predicted Functional Partners:
Tter_2665
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mgm:Mmc1_2015 DEAD/DEAH box helicase domain protein.
       0.551
Tter_2663
TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mxa:MXAN_6347 putative chromate transporter.
       0.522
Tter_2666
KEGG: atc:AGR_L_146 hypothetical protein.
       0.507
Tter_0797
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bcb:BCB4264_A3893 stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.446
Tter_1200
KEGG: ypm:YP_2290 hypothetical protein.
  
 
   0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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